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Title | Multi-Ethnic Genome-Wide Association Study of Decomposed Cardioelectric Phenotypes Illustrates Strategies to Identify and Characterize Evidence of Shared Genetic Effects for Complex Traits. |
Publication Type | Journal Article |
Year of Publication | 2020 |
Authors | Baldassari, AR, Sitlani, CM, Highland, HM, Arking, DE, Buyske, S, Darbar, D, Gondalia, R, Graff, M, Guo, X, Heckbert, SR, Hindorff, LA, Hodonsky, CJ, Chen, Y-DIda, Kaplan, RC, Peters, U, Post, W, Reiner, AP, Rotter, JI, Shohet, RV, Seyerle, AA, Sotoodehnia, N, Tao, R, Taylor, KD, Wojcik, GL, Yao, J, Kenny, EE, Lin, HJ, Soliman, EZ, Whitsel, EA, North, KE, Kooperberg, C, Avery, CL |
Journal | Circ Genom Precis Med |
Volume | 13 |
Issue | 4 |
Pagination | e002680 |
Date Published | 2020 08 |
ISSN | 2574-8300 |
Abstract | BACKGROUND: We examined how expanding electrocardiographic trait genome-wide association studies to include ancestrally diverse populations, prioritize more precise phenotypic measures, and evaluate evidence for shared genetic effects enabled the detection and characterization of loci. METHODS: We decomposed 10 seconds, 12-lead electrocardiograms from 34 668 multi-ethnic participants (15% Black; 30% Hispanic/Latino) into 6 contiguous, physiologically distinct (P wave, PR segment, QRS interval, ST segment, T wave, and TP segment) and 2 composite, conventional (PR interval and QT interval) interval scale traits and conducted multivariable-adjusted, trait-specific univariate genome-wide association studies using 1000-G imputed single-nucleotide polymorphisms. Evidence of shared genetic effects was evaluated by aggregating meta-analyzed univariate results across the 6 continuous electrocardiographic traits using the combined phenotype adaptive sum of powered scores test. RESULTS: We identified 6 novels (, and ) and 87 known loci (adaptive sum of powered score test CONCLUSIONS: Despite including one-third as many participants as published electrocardiographic trait genome-wide association studies, our study identified 6 novel loci, emphasizing the importance of ancestral diversity and phenotype resolution in this era of ever-growing genome-wide association studies. |
DOI | 10.1161/CIRCGEN.119.002680 |
Alternate Journal | Circ Genom Precis Med |
PubMed ID | 32602732 |
PubMed Central ID | PMC7520945 |
Grant List | 75N95020D00003 / DA / NIDA NIH HHS / United States N01HC95160 / HL / NHLBI NIH HHS / United States N01HC95169 / HL / NHLBI NIH HHS / United States T32 HL129982 / HL / NHLBI NIH HHS / United States U01 HG009080 / HG / NHGRI NIH HHS / United States 75N99020D00007 / OF / ORFDO NIH HHS / United States UL1 TR001881 / TR / NCATS NIH HHS / United States 75N99020D00004 / OF / ORFDO NIH HHS / United States HHSN268201100001I / HL / NHLBI NIH HHS / United States HHSN268201500003C / HL / NHLBI NIH HHS / United States 75N90020D00002 / CL / CLC NIH HHS / United States U01 HG007419 / HG / NHGRI NIH HHS / United States UL1 RR025005 / RR / NCRR NIH HHS / United States R01 ES020836 / ES / NIEHS NIH HHS / United States N01HC95163 / HL / NHLBI NIH HHS / United States UL1 TR001079 / TR / NCATS NIH HHS / United States 75N96020D00002 / ES / NIEHS NIH HHS / United States HHSN268201100004I / HL / NHLBI NIH HHS / United States U01 HG007416 / HG / NHGRI NIH HHS / United States 75N93020D00002 / AI / NIAID NIH HHS / United States U01 HG009610 / HG / NHGRI NIH HHS / United States 75N99020D00003 / OF / ORFDO NIH HHS / United States HHSN268201100046C / HL / NHLBI NIH HHS / United States 75N95020D00002 / DA / NIDA NIH HHS / United States R01 HL086694 / HL / NHLBI NIH HHS / United States N01HC65236 / HL / NHLBI NIH HHS / United States L30 HG009840 / HG / NHGRI NIH HHS / United States R01 HL138737 / HL / NHLBI NIH HHS / United States HHSN268201100003C / WH / WHI NIH HHS / United States U01 HG007376 / HG / NHGRI NIH HHS / United States N01HC65235 / HL / NHLBI NIH HHS / United States U01 HG004402 / HG / NHGRI NIH HHS / United States N01HC95164 / HL / NHLBI NIH HHS / United States N02HL64278 / HL / NHLBI NIH HHS / United States N01HC95162 / HL / NHLBI NIH HHS / United States N01HC65234 / HL / NHLBI NIH HHS / United States N01HC95168 / HL / NHLBI NIH HHS / United States HHSN268201200008C / HL / NHLBI NIH HHS / United States 75N90020D00003 / CL / CLC NIH HHS / United States 75N96020D00003 / ES / NIEHS NIH HHS / United States P30 DK063491 / DK / NIDDK NIH HHS / United States 75N99020D00002 / OF / ORFDO NIH HHS / United States N01HC65233 / HL / NHLBI NIH HHS / United States HHSN268201700002C / HL / NHLBI NIH HHS / United States R01 DK101855 / DK / NIDDK NIH HHS / United States HHSN268201700001I / HL / NHLBI NIH HHS / United States 75N99020D00006 / OF / ORFDO NIH HHS / United States N01HC65237 / HL / NHLBI NIH HHS / United States P20 GM113134 / GM / NIGMS NIH HHS / United States HHSN271201100004C / AG / NIA NIH HHS / United States HHSN268201700004I / HL / NHLBI NIH HHS / United States N01HC95165 / HL / NHLBI NIH HHS / United States N01HC95159 / HL / NHLBI NIH HHS / United States 75N95020D00007 / DA / NIDA NIH HHS / United States N01HC95161 / HL / NHLBI NIH HHS / United States T32 HL139439 / HL / NHLBI NIH HHS / United States HHSN268201100002C / WH / WHI NIH HHS / United States UL1 TR001420 / TR / NCATS NIH HHS / United States R01 HL104608 / HL / NHLBI NIH HHS / United States 75N95020D00005 / DA / NIDA NIH HHS / United States HHSN268201500003I / HL / NHLBI NIH HHS / United States R01 HL142825 / HL / NHLBI NIH HHS / United States HHSN268201700005C / HL / NHLBI NIH HHS / United States HHSN268201700001C / HL / NHLBI NIH HHS / United States 75N99020D00005 / OF / ORFDO NIH HHS / United States N01HC95167 / HL / NHLBI NIH HHS / United States HHSN268201700003C / HL / NHLBI NIH HHS / United States HHSN268201700004C / HL / NHLBI NIH HHS / United States UL1 TR000040 / TR / NCATS NIH HHS / United States HHSN268201100003I / HL / NHLBI NIH HHS / United States HHSN268201100002I / HL / NHLBI NIH HHS / United States HHSN268201700002I / HL / NHLBI NIH HHS / United States HHSN268201700005I / HL / NHLBI NIH HHS / United States 75N98020D00007 / OD / NIH HHS / United States N01HC95166 / HL / NHLBI NIH HHS / United States R01 HL087641 / HL / NHLBI NIH HHS / United States HHSN268201700003I / HL / NHLBI NIH HHS / United States HHSN268201200008I / HL / NHLBI NIH HHS / United States HHSN268201100001C / WH / WHI NIH HHS / United States 75N95020D00004 / DA / NIDA NIH HHS / United States HHSN268201100004C / WH / WHI NIH HHS / United States R01 HL111089 / HL / NHLBI NIH HHS / United States R01 HL116747 / HL / NHLBI NIH HHS / United States |